-
Bernardi, G. 1995. The human genome: Organization and evolutionary history.
Annu. Rev. Genet. 29: 445-476.
-
Bernardi, G., D. Mouchiroud, and C. Gautier. 1997. Isochores and synonymous
substitutions in mammalian genes. In DNA and Protein Sequence Analysis
(eds. M.J. Bishop and C.J. Rawlings). IRL Press, Oxford.
- Castillo-Davis,
C.I., S.L. Mekhedov, D.L. Hartl, E.V. Koonin, and F.A. Kondrashov. 2002.
Selection for short introns in highly expressed genes. Nat Genet
31: 415-418.
- Eyrewalker,
A.C. 1991. An Analysis of Codon Usage in Mammals - Selection or Mutation
Bias. J. Mol. Evol. 33: 442-449.
- Hughes,
S., D. Zelus, and D. Mouchiroud. 1999. Warm-blooded isochore structure
in Nile crocodile and turtle. Mol. Biol. Evol. 16: 1521-1527.
- Ikemura,
T. and K. Wada. 1991. Evident Diversity of Codon Usage Patterns of Human
Genes with Respect to Chromosome-Banding Patterns and Chromosome-Numbers
- Relation between Nucleotide-Sequence Data and Cytogenetic Data.
Nucleic Acids Res 19: 4333-4339.
- Kanaya,
S., Y. Yamada, Y. Kudo, and T. Ikemura. 1999. Studies of codon usage
and tRNA genes of 18 unicellular organisms and quantification of Bacillus
subtilis tRNAs: gene expression level and species-specific diversity
of codon usage based on multivariate analysis. Gene 238: 143-155.
- Kimura,
M. 1991. The neutral theory of molecular evolution: a review of recent
evidence. Jpn J Genet 66: 367-386.
- Lander,
E.S. L.M. Linton B. Birren C. Nusbaum M.C. Zody J. Baldwin K. Devon
K. Dewar M. Doyle W. FitzHugh et al. 2001. Initial sequencing and analysis
of the human genome. Nature 409: 860-921.
- Levy,
J.P., R.R. Muldoon, S. Zolotukhin, and C.J. Link. 1996. Retroviral transfer
and expression of a humanized, red-shifted green fluorescent protein
gene into human tumor cells. Nat. Biotechnol. 14: 610-614.
- Li,
W.-H. 1997. Molecular Evolution. Sinauer, Sundetland, Mass.
- Moriyama,
E.N. and J.R. Powell. 1997. Codon usage bias and tRNA abundance in Drosophila.
J. Mol. Evol. 45: 514-523.
- Sharp,
P.M., M. Averof, A.T. Lloyd, G. Matassi, and J.F. Peden. 1995. DNA-Sequence
Evolution - the Sounds of Silence. Philos. Trans. R. Soc. Lond.
B 349: 241-247.
- Su,
A.I., M.P. Cooke, K.A. Ching, Y. Hakak, J.R. Walker, T. Wiltshire, A.P.
Orth, R.G. Vega, L.M. Sapinoso, A. Moqrich et al. 2002. Large-scale
analysis of the human and mouse transcriptomes. Proc. Natl Acad.
Sci. U.S.A. 99: 4465-4470.
- Urrutia,
A.O. and L.D. Hurst. 2001. Codon usage bias covaries with expression
breadth and the rate of synonymous evolution in humans, but this is
not evidence for selection. Genetics 159: 1191-1199.
- ---.
2003. The signature of selection mediated by expression on human genes.
Genome Res 13: 2260-2264.
- Velculescu,
V.E., L. Zhang, B. Vogelstein, and K.W. Kinzler. 1995. Serial Analysis
of Gene-Expression. Science 270: 484-487.
- Venter,
J.C. M.D. Adams E.W. Myers P.W. Li R.J. Mural G.G. Sutton H.O. Smith
M. Yandell C.A. Evans R.A. Holt et al. 2001. The sequence of the human
genome. Science 291: 1304-1351.
- Versteeg,
R., B.D. Van Schaik, M.F. Van Batenburg, M. Roos, R. Monajemi, H. Caron,
H.J. Bussemaker, and A.H. Van Kampen. 2003. The Human Transcriptome
Map Reveals Extremes in Gene Density, Intron Length, GC Content, and
Repeat Pattern for Domains of Highly and Weakly Expressed Genes. Genome
Res 12: 12.
- Wells,
K.D., J.A. Foster, K. Moore, V.G. Pursel, and R.J. Wall. 1999. Codon
optimization, genetic insulation, and an rtTA reporter improve performance
of the tetracycline switch. Transgenic Res. 8: 371-381.
- Zhou,
J., W.J. Liu, S.W. Peng, X.Y. Sun, and I. Frazer. 1999. Papillomavirus
capsid protein expression level depends on the match between codon usage
and tRNA availability. J. Virol. 73: 4972-4982.
- Zolotukhin,
S., M. Potter, W.W. Hauswirth, J. Guy, and N. Muzyczka. 1996. A ''humanized''
green fluorescent protein cDNA adapted for high-level expression in
mammalian cells. J. Virol. 70: 4646-4654.
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